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Protein A002590
Author-entered Data
V1.0, Peer Reviewed
Published 26 Jul 2006
Automated Data
Not Reviewed
As At Publication
Automated Data
Not Reviewed
Latest from 7 Sep 2010

Pept1

Latest domains and motifs retrieved 7 Sep 2010

doi:10.1038/mp.a002590.01  How to cite this Molecule Page

Quick Links
Matching InterPro Records
Matching Pfam / SMART Records
Matching PRINTS Records
 
Domain Map
Oligopeptide transporter Pfam: POT family 81-476: POT family 566-627: POT family Pfam: Alginate O-acetyl transferase AlgF 479-574: Alginate O-acetyl transferase AlgF
 
Family References without Computational Evidence
Database IDInterpro symbolInterpro Name
IPR016196MFS_general_subst_transptMajor facilitator superfamily, general substrate transporter
IPR018456PTR2_symporter_CSPTR2 family proton/oligopeptide symporter, conserved site
IPR004768Pep_H_symportOligopeptide transporter, peptide:H+ symporter
 
Other Representations
NCBI Conserved Domain Summary
InterPro detailed matches for identical protein(s): Q9JIP7  
Pfam domain map for identical protein(s): Q9JIP7  
InterPro detailed matches for variant protein(s): P70264   Q14BA3   Q3UWE2   Q9ES78  
Pfam domain map for variant protein(s): P70264   Q14BA3   Q3UWE2   Q9ES78  
 
Matching InterPro Records
Database IDIPR016196 (MFS_general_subst_transpt)
NameMajor facilitator superfamily, general substrate transporter
Abstract

This entry represents the major facilitator superfamily (MFS) domain, which consists of twelve transmembrane helices. MFS proteins are the largest group of secondary membrane transporters in the cell. Among the different families of transporters, only two occur ubiquitously in all classifications of organisms; these are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients []. The MFS family contains members that function as uniporters, symporters or antiporters. In addition their solute specificity are also diverse. MFS proteins contain 12 transmembrane regions (with some variations).

This domain can be found in glycerol-3-phosphate transporter from Escherichia coli, which transports glycerol-3-phosphate into the cytoplasm and inorganic phosphate into the periplasm []. The E. coli proton/sugar transporter lactose permease (LacY) also carries this domain, and acts to couple lactose and H+ translocation [].

Referenced By Molecule Page ProteinYes
Interpro TypeDomain
Gene Ontology-
Signatures & LinksSSF103473 (SSF), MFS_gen_substrate_transporter, num proteins = 100684
Structure References
f.38.1.1 (SCOP)f.38.1.2 (SCOP)1.20.1250.20 (CATH)1pv6 (PDB)
1pv7 (PDB)1pw4 (PDB)2cfp (PDB)2cfq (PDB)
 
Database IDIPR000109 (Oligopeptide_transporter)
NameOligopeptide transporter
Abstract

This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton [].

These integral membrane proteins are predicted to comprise twelve transmembrane regions.

Referenced By Molecule Page ProteinYes
Interpro TypeDomain
Gene OntologyGO:0016020, membrane, Cellular Component
GO:0005215, transporter activity, Molecular Function
GO:0006857, oligopeptide transport, Biological Process
Signatures & LinksIPB000109 (BLOCKS)
PS01022 (MSDsite)
PS01023 (MSDsite)
PF00854 (PANDIT)
PF00854 (PFAM), PTR2, num proteins = 3293
PDOC00784 (PROSITEDOC)
Structure References-
 
Database IDIPR018456 (PTR2_symporter_CS)
NamePTR2 family proton/oligopeptide symporter, conserved site
Abstract

The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The PTR family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton [].

These integral membrane proteins are predicted to comprise twelve transmembrane regions.

This entry describes two conserved sites. The first conserved site is found within a region that includes the end of the second transmembrane region, a cytoplasmic loop as well as the third transmembrane region. The second conserved site corresponds to the core of the fifth transmembrane region.

Referenced By Molecule Page ProteinYes
Interpro TypeConserved_site
Gene OntologyGO:0016020, membrane, Cellular Component
GO:0005215, transporter activity, Molecular Function
GO:0006857, oligopeptide transport, Biological Process
Signatures & LinksPS01022 (PROSITE), PTR2_1, num proteins = 1242
PS01023 (PROSITE), PTR2_2, num proteins = 1888
Structure References-
 
Database IDIPR004768 (Pep_H_symport)
NameOligopeptide transporter, peptide:H+ symporter
Abstract

Oligopeptide transporter, peptide:H+ symporter supports the proton-coupled intake of oligopeptides of 2 to 4 amino acids. These proteins may constitute a major route for the absorption of the end products of protein digestion.

Referenced By Molecule Page ProteinYes
Interpro TypeFamily
Gene OntologyGO:0016021, integral to membrane, Cellular Component
GO:0015198, oligopeptide transporter activity, Molecular Function
GO:0006857, oligopeptide transport, Biological Process
Signatures & LinksTIGR00926 (TIGRFAMs), 2A1704, num proteins = 44
Structure References-
 
Matching Pfam / SMART Records
PFam (hmmpfam) Output
Database IDPF00854 (PTR2)
DescriptionPOT family
Score443.5
E Value0.00E0
Num Matches2
Referenced By Molecule Page ProteinYes
Match NumSequence CoordsModel CoordsScoreE Value
181-4761-372434.12.70E-130
2566-627332-3689.23.50E-1

Database IDPF11182 (AlgF)
DescriptionAlginate O-acetyl transferase AlgF
Score13.9
E Value2.40E-2
Num Matches1
Referenced By Molecule Page ProteinNo
Match NumSequence CoordsModel CoordsScoreE Value
1479-57422-8112.28.00E-2

 
Matching PRINTS Records

No entries found in this category.


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